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Published on:

March 7, 2025

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Appeal Against Disallowance of GSTR-3B and GSTR-2A Mismatch

It has been quite a challenge for the taxpayer under the Goods and Services Tax (GST) to comprehend the difference between GSTR-3B and GSTR-2A. GSTR-3B is explained as a self-declared summary of taxes, while GSTR-2A is explained as a system-generated document for details related to Input Tax Credit (ITC). Tax authorities often deny credit if these do not match. This can be a severe financial loss to businesses, such as when the business pays up a supplier and brings it into their GSTR-3B but if the supplier does not file GSTR-1, that transaction will not show in GSTR-2A, and the tax authorities on such incidences have rejected ITC.

Businesses will also need to develop an understanding of the appeals process when ITC is not granted. Further, they need to understand the legal rules and compliance steps to avoid these challenges. This article aims to show how one can appeal against disallowed ITC, the legal grounds for appeals, and how compliance is made under GST.

Understanding GSTR-3B and GSTR-2A

Before tackling the appeal, let's understand these two GST returns:

1. GSTR-3B: A summary return for the month, where taxpayers self-declare their ITC, outward supplies, and tax liability.

2. GSTR-2A: A return that is dynamic by nature, auto-generated from the GSTR-1 of the suppliers, indicating the ITC available to the recipient.

If the ITC claims are not matched with GSTR-3B and GSTR-2A, it results in the tax authorities refusing that credit.

For More Information Visit GSTR-2A Return Filing And Format

Reasons for GSTR-3B and GSTR-2A Mismatch

1. Non-filing of the supplier: If the supplier does not file their GSTR-1, then his details do not show in GSTR-2A.

2. Timing Difference: The returns are filed by the suppliers in different periods leading to a mismatch.

3. Clerical Mistakes: Mistakes in invoice numbers, GSTINs, or amounts sometimes lead to mismatches.

4. Rejection of some ITC Claims: Some ITC claims are prohibited under the GST compliances.

5. Amendments by Suppliers: If suppliers modify invoices after the transaction, it may not be reflected in the recipient's returns.

Legal Grounds for Appeal

The right of taxpayers to appeal the disallowance of ITC as provided under Section 107 of the CGST Act, 2017, about GST is accompanied by certain legal grounds, which include:

1. Genuine Transactions: The buyer is not to be affected when a mismatch arises owing to the seller's non-compliance.

2. Clerical or Procedural Errors: Cost recovery should not be denied for minor errors.

3. Documentary Evidence: Providing copies of invoices, proofs of payments, and statements of reconciliation should, therefore, be in support of the appeal.

How to File an Appeal Against GSTR-3B and GSTR-2A Mismatch Disallowance

Step 1: Submit a Response to the Show Cause Notice (SCN)

If you have received an SCN about the disallowance of ITC, it should be replied to in detail while attaching the relevant documents.

Invoices, GSTR-2A reconciliation, and proof of payment should be attached to this reply.

Step 2: File an Appeal with the GST Appellate Authority

If the ITC disallowance continues, then the time has come to appeal against the First Appellate Authority under GST:

It would be filed from Form GST APL-01 within three months from the day of the order.

Make payment of the prescribed amount as pre-deposit (10 percent of the disputed amount).

Enclosed with all requisite documents and legal arguments.

Step 3: Hearing Before the Appellate Authority

The Appellate Authority will consider your case and might require supplemental evidence.

Present your arguments considering legal provisions with applicable case laws.

Step 4: Appeal to the GST Tribunal (If Required)

In case your appeal is rejected by the First Appellate Authority, you can approach the GST Appellate Tribunal.

Step 5: Appeal to the High Court and Supreme Court (If Needed)

If the Tribunal passes an adverse order, further appeal may be taken to the High Court and the Supreme Court.

To know more about GSTR-3B visit Understanding gst return exploring the basics of gstr 3b

Compliance Measures to Avoid GSTR-3B and GSTR-2A Mismatch Issues

1. Daily Reconciliation: Reconcile your GSTR-3B and GSTR-2A regularly following the previous month.

2. Follow Up with Suppliers: Ensure suppliers submit their GSTR-1 in time.

3. Use Automated Tools: Use GST reconciliation software for early mismatch detection.

4. Claim Eligible ITC Only: Refrain from claiming ITC on ineligible expenses.

5. Keep Proper Documentation: Invoice and payment records need to be maintained for audit use.

Conclusion

If you are going to challenge a disallowance on GSTR-3B and GSTR-2A mismatch, you better have good records and a sound legal case. Regularly reconcile your GSTR-3B with GSTR-2A; this will enable you to detect and correct errors quickly. Engage with your suppliers frequently. Good teamwork will try to prevent such problems from cropping up in the first place.

It is advisable to protect your tax credits. This is the avenue provided under the tax system to rectify a mistake. Whenever the law is on their side, businesses would be wise to put it to their benefit. The present guide is for enabling taxpayers in GST disputes. Following these tips would assist in adhering to tax and avoiding penalties. You would also know how to stand up for your rights in case the department makes an error regarding your GST.

FAQs

1. What if my GSTR-3B and GSTR-2A do not match?

In case of a mismatch, tax authorities can issue SCN, and ITC may be disallowed until the differences are resolved.

2. Am I able to file an appeal against the disallowance of ITC due to non-compliance on the supplier's side?

Yes, you can file an appeal accompanied by proof of genuine transactions and evidence of payment.

3. What is the time limit to appeal against the disallowance of ITC?

One must file an appeal within three months from the order date.

4. What are the requisite documents to be filed with the appeal?

Invoices, reconciliation statements, payment evidence to the supplier, and legal grounds.

5. Is there any way to avoid a mismatch between GSTR-3B and GSTR-2A?

Yes, by way of regular reconciliation, follow-ups with the suppliers, and using automatic GST tools.

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